nf-core/ampliseq


Description
nfcore/ampliseq is a bioinformatics analysis pipeline used for amplicon sequencing, supporting denoising of any amplicon and, currently, taxonomic assignment of 16S, ITS and 18S amplicons.

Supported is paired-end Illumina or single-end Illumina, PacBio and IonTorrent data. Default is the analysis of 16S rRNA gene amplicons sequenced paired-end with Illumina


Link
nf-co.re/ampliseq

Type
Software
Subtypes
Evaluation Tool
Focuses
Microbiome

Topics
Data analysis

Contacts
Dr. Daniel Straub
Dr. Daniel Straub

Eberhard Karls Universität Tübingen

OMICS-Daten

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User groups / addressees
Scientists

keywords
Analyses
OMICS


Preview image
Preview image

File type
webpage

License
MIT License


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